Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Gm18584-201ENSMUST00000203098 964 ntBASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hmcn1D3YXG0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm12416-201ENSMUST00000120911 1008 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm17823-201ENSMUST00000217830 1006 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm5828-201ENSMUST00000071842 1860 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm45751-201ENSMUST00000210185 1573 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm11658-201ENSMUST00000120913 1008 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm15376-201ENSMUST00000122258 783 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm6981-201ENSMUST00000182467 1008 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm9540-201ENSMUST00000188230 478 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Mir125a-201ENSMUST00000083545 68 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Gm14267-206ENSMUST00000226870 1209 ntBASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Hmcn1D3YXG0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms