Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Gm6623-201ENSMUST00000173570 544 ntBASIC17.21■□□□□ 0.35
Syce3B5KM66 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Syce3B5KM66 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Syce3B5KM66 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.21■□□□□ 0.34
Syce3B5KM66 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Syce3B5KM66 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Syce3B5KM66 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.2■□□□□ 0.34
Syce3B5KM66 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gm19164-201ENSMUST00000210667 640 ntBASIC17.2■□□□□ 0.34
Syce3B5KM66 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.2■□□□□ 0.34
Syce3B5KM66 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Syce3B5KM66 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Syce3B5KM66 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.19■□□□□ 0.34
Syce3B5KM66 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Syce3B5KM66 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.18■□□□□ 0.34
Syce3B5KM66 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Syce3B5KM66 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syce3B5KM66 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms