Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom2A2ALU4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC23.27■■□□□ 1.31
Shroom2A2ALU4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom2A2ALU4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Gm2639-201ENSMUST00000156881 1297 ntBASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Gm43818-201ENSMUST00000200605 466 ntBASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 BC001981-202ENSMUST00000191393 1545 ntBASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom2A2ALU4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Gm13612-201ENSMUST00000119276 390 ntBASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Gm38158-201ENSMUST00000194617 339 ntBASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Shroom2A2ALU4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Gm45606-201ENSMUST00000209836 2795 ntBASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Gm17823-201ENSMUST00000217830 1006 ntBASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom2A2ALU4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC23.22■■□□□ 1.31
Shroom2A2ALU4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shroom2A2ALU4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Shroom2A2ALU4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Shroom2A2ALU4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Shroom2A2ALU4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC23.2■■□□□ 1.3
Shroom2A2ALU4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms