Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.99□□□□□ -0.17
IsxA1A546 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.99□□□□□ -0.17
IsxA1A546 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IsxA1A546 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.99□□□□□ -0.17
IsxA1A546 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Gm18032-201ENSMUST00000222541 538 ntBASIC13.99□□□□□ -0.17
IsxA1A546 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IsxA1A546 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.99□□□□□ -0.17
IsxA1A546 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IsxA1A546 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.99□□□□□ -0.17
IsxA1A546 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IsxA1A546 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
IsxA1A546 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
IsxA1A546 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
IsxA1A546 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.98□□□□□ -0.17
IsxA1A546 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.98□□□□□ -0.17
IsxA1A546 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
IsxA1A546 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
IsxA1A546 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IsxA1A546 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
IsxA1A546 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
IsxA1A546 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IsxA1A546 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.97□□□□□ -0.17
IsxA1A546 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.97□□□□□ -0.17
IsxA1A546 Gm23634-201ENSMUST00000175071 91 ntBASIC13.97□□□□□ -0.17
IsxA1A546 Gm22697-201ENSMUST00000175194 63 ntBASIC13.97□□□□□ -0.17
IsxA1A546 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.97□□□□□ -0.17
IsxA1A546 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.97□□□□□ -0.17
IsxA1A546 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IsxA1A546 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IsxA1A546 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
IsxA1A546 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.96□□□□□ -0.17
IsxA1A546 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
IsxA1A546 AA414768-201ENSMUST00000121924 1257 ntBASIC13.96□□□□□ -0.17
IsxA1A546 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.96□□□□□ -0.17
IsxA1A546 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.96□□□□□ -0.17
IsxA1A546 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.96□□□□□ -0.17
IsxA1A546 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IsxA1A546 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IsxA1A546 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
IsxA1A546 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IsxA1A546 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IsxA1A546 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.96□□□□□ -0.18
IsxA1A546 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IsxA1A546 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms