Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Carlr-201ENSMUST00000181515 2574 ntBASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Gm23547-201ENSMUST00000158210 271 ntBASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav12-1A0N8R1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm7284-201ENSMUST00000131667 944 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm10499-201ENSMUST00000174094 934 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm27646-201ENSMUST00000183989 110 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm43767-201ENSMUST00000198933 381 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12-1A0N8R1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms