Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-1A0N8R0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Carlr-201ENSMUST00000181515 2574 ntBASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Gm10252-201ENSMUST00000209541 832 ntBASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-1A0N8R0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12d-1A0N8R0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 AA414768-201ENSMUST00000121924 1257 ntBASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Gm23634-201ENSMUST00000175071 91 ntBASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Gm43767-201ENSMUST00000198933 381 ntBASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Gm7506-201ENSMUST00000207758 815 ntBASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms