Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Carlr-201ENSMUST00000181515 2574 ntBASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc112A0AUP1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gm43767-201ENSMUST00000198933 381 ntBASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc112A0AUP1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc112A0AUP1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms