Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vma21-psA0A140T8R2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
Vma21-psA0A140T8R2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21-psA0A140T8R2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.98□□□□□ -0.49
Vma21-psA0A140T8R2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms