Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm7222-201ENSMUST00000117512 906 ntBASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm37153-201ENSMUST00000193637 231 ntBASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm28659-201ENSMUST00000188013 759 ntBASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9n-2A0A0G2JDP3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms