Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-1A0A075B699 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-1A0A075B699 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav9d-1A0A075B699 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms