Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm27646-201ENSMUST00000183989 110 ntBASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.33□□□□□ -0.44
Trav18A0A075B656 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.33□□□□□ -0.44
Trav18A0A075B656 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.33□□□□□ -0.44
Trav18A0A075B656 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav18A0A075B656 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav18A0A075B656 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.32□□□□□ -0.44
Trav18A0A075B656 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav18A0A075B656 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Gm10499-201ENSMUST00000174094 934 ntBASIC12.31□□□□□ -0.44
Trav18A0A075B656 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Gm6296-201ENSMUST00000222599 943 ntBASIC12.31□□□□□ -0.44
Trav18A0A075B656 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trav18A0A075B656 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav18A0A075B656 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms