Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-1A0A075B5Z8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Olfr129-201ENSMUST00000122318 993 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm10231-201ENSMUST00000181584 441 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm10175-202ENSMUST00000208752 441 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav6-1A0A075B5Z8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Mir6982-201ENSMUST00000184354 68 ntBASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav6-1A0A075B5Z8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-1A0A075B5Z8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms