Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm5587-201ENSMUST00000206270 674 ntBASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm45328-201ENSMUST00000210942 917 ntBASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Upk1bQ9Z2C6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Gm8344-201ENSMUST00000119813 856 ntBASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1bQ9Z2C6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1bQ9Z2C6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1bQ9Z2C6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.96□□□□□ -0.18
Upk1bQ9Z2C6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1bQ9Z2C6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Gm6433-201ENSMUST00000118634 875 ntBASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Gm11950-201ENSMUST00000121615 838 ntBASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Upk1bQ9Z2C6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1bQ9Z2C6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms