Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h3Q9Z0Y9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22175-201ENSMUST00000175007 78 ntBASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm10253-201ENSMUST00000194270 940 ntBASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h3Q9Z0Y9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Mir7023-201ENSMUST00000185093 64 ntBASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h3Q9Z0Y9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22065-201ENSMUST00000103753 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22066-201ENSMUST00000103761 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24932-201ENSMUST00000103763 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24115-201ENSMUST00000103799 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22190-201ENSMUST00000103827 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22191-201ENSMUST00000103831 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24721-201ENSMUST00000103849 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm28018-201ENSMUST00000103869 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm26399-201ENSMUST00000103937 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25349-201ENSMUST00000177728 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm23616-201ENSMUST00000177797 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25871-201ENSMUST00000177816 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24752-201ENSMUST00000178240 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24496-201ENSMUST00000178287 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25649-201ENSMUST00000178476 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25548-201ENSMUST00000178681 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm23147-201ENSMUST00000178841 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm26095-201ENSMUST00000179270 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22171-201ENSMUST00000179283 110 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms