Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cx3cr1Q9Z0D9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cx3cr1Q9Z0D9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm10013-201ENSMUST00000106074 672 ntBASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm23547-201ENSMUST00000158210 271 ntBASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm45328-201ENSMUST00000210942 917 ntBASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Cx3cr1Q9Z0D9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms