Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm24752-201ENSMUST00000178240 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24496-201ENSMUST00000178287 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25649-201ENSMUST00000178476 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25548-201ENSMUST00000178681 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm23147-201ENSMUST00000178841 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm26095-201ENSMUST00000179270 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22171-201ENSMUST00000179283 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm23936-201ENSMUST00000179354 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm22619-201ENSMUST00000179516 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25255-201ENSMUST00000179579 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24755-201ENSMUST00000179691 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm26506-201ENSMUST00000179692 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm25086-201ENSMUST00000179931 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm23243-201ENSMUST00000180047 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24659-201ENSMUST00000180212 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm24169-201ENSMUST00000180244 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm23689-201ENSMUST00000180354 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm27359-201ENSMUST00000184153 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm27785-201ENSMUST00000184268 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm27466-201ENSMUST00000184396 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm27703-201ENSMUST00000184836 110 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm17837-201ENSMUST00000186435 985 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col13a1Q9R1N9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Gm38294-201ENSMUST00000192831 381 ntBASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col13a1Q9R1N9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.8□□□□□ -0.36
Col13a1Q9R1N9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms