Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubd1Q9R1K7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Carlr-201ENSMUST00000181515 2574 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Gm5264-201ENSMUST00000190584 848 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Gm20553-201ENSMUST00000204205 844 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubd1Q9R1K7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm2451-201ENSMUST00000199447 999 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm10290-201ENSMUST00000200451 999 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tubd1Q9R1K7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tubd1Q9R1K7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms