Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn2Q9R0A1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn2Q9R0A1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn2Q9R0A1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn2Q9R0A1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.39■□□□□ 0.05
Clcn2Q9R0A1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Gm14722-201ENSMUST00000118943 689 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Gm6089-201ENSMUST00000197666 938 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn2Q9R0A1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn2Q9R0A1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gm10060-201ENSMUST00000212002 111 ntBASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms