Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps29Q9QZ88 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps29Q9QZ88 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Gm6550-201ENSMUST00000187574 993 ntBASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps29Q9QZ88 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.4□□□□□ -0.1
Vps29Q9QZ88 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps29Q9QZ88 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Vps29Q9QZ88 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Gm11452-201ENSMUST00000122376 690 ntBASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps29Q9QZ88 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.38□□□□□ -0.11
Vps29Q9QZ88 Mir8098-201ENSMUST00000184011 137 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms