Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim39Q9ESN2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm8825-201ENSMUST00000182565 998 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm4518-201ENSMUST00000182638 718 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm7506-201ENSMUST00000207758 815 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Gm10819-201ENSMUST00000099988 561 ntBASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim39Q9ESN2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trim39Q9ESN2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim39Q9ESN2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim39Q9ESN2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Trim39Q9ESN2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim39Q9ESN2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim39Q9ESN2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms