Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm18624-201ENSMUST00000220966 658 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm9396-201ENSMUST00000076703 567 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx2-4Q9EQM3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Gm10766-202ENSMUST00000194123 606 ntBASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Gm16476-201ENSMUST00000221544 139 ntBASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx2-4Q9EQM3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Gm15806-201ENSMUST00000120696 955 ntBASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Gm28760-201ENSMUST00000185995 736 ntBASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx2-4Q9EQM3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-4Q9EQM3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-4Q9EQM3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nkx2-4Q9EQM3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Mir6392-201ENSMUST00000184924 108 ntBASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Gm9797-201ENSMUST00000052902 613 ntBASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
Nkx2-4Q9EQM3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Gm5479-201ENSMUST00000160578 435 ntBASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx2-4Q9EQM3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms