Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Gm10499-201ENSMUST00000174094 934 ntBASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a3bpQ9EQG9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Gm15590-201ENSMUST00000078419 552 ntBASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a3bpQ9EQG9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a3bpQ9EQG9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a3bpQ9EQG9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a3bpQ9EQG9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a3bpQ9EQG9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a3bpQ9EQG9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms