Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ssr3Q9DCF9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Gm21814-202ENSMUST00000203277 873 ntBASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssr3Q9DCF9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssr3Q9DCF9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssr3Q9DCF9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssr3Q9DCF9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms