Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne8Q9DC53 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Gm13884-201ENSMUST00000118103 829 ntBASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpne8Q9DC53 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gm7222-201ENSMUST00000117512 906 ntBASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne8Q9DC53 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne8Q9DC53 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Gm43767-201ENSMUST00000198933 381 ntBASIC15.66■□□□□ 0.1
Cpne8Q9DC53 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne8Q9DC53 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms