Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk1aQ9D132 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk1aQ9D132 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk1aQ9D132 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Gm13836-201ENSMUST00000121159 501 ntBASIC14.26□□□□□ -0.13
Upk1aQ9D132 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk1aQ9D132 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.25□□□□□ -0.13
Upk1aQ9D132 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.25□□□□□ -0.13
Upk1aQ9D132 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk1aQ9D132 Gm8344-201ENSMUST00000119813 856 ntBASIC14.25□□□□□ -0.13
Upk1aQ9D132 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms