Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Gm5682-201ENSMUST00000173402 505 ntBASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndc80Q9D0F1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.29■□□□□ 0.04
Ndc80Q9D0F1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc80Q9D0F1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc80Q9D0F1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc80Q9D0F1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc80Q9D0F1 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms