Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt2Q9CZN7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Shmt2Q9CZN7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt2Q9CZN7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Gm7230-201ENSMUST00000173026 815 ntBASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shmt2Q9CZN7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Gm10060-201ENSMUST00000212002 111 ntBASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shmt2Q9CZN7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms