Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nip7Q9CXK8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nip7Q9CXK8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Syt7-204ENSMUST00000223586 1344 ntBASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Nip7Q9CXK8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Dancr-204ENSMUST00000132389 2347 ntBASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm24543-201ENSMUST00000103867 82 ntBASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm5479-201ENSMUST00000160578 435 ntBASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm9719-201ENSMUST00000162765 543 ntBASIC18.63■□□□□ 0.57
Nip7Q9CXK8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm27838-201ENSMUST00000184829 128 ntBASIC18.63■□□□□ 0.57
Nip7Q9CXK8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nip7Q9CXK8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Gm5566-201ENSMUST00000116118 459 ntBASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nip7Q9CXK8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.61■□□□□ 0.57
Nip7Q9CXK8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nip7Q9CXK8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms