Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gm14822-201ENSMUST00000122247 291 ntBASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc1aQ9CU62 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.85■□□□□ 0.29
Smc1aQ9CU62 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc1aQ9CU62 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1aQ9CU62 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1aQ9CU62 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.83■□□□□ 0.29
Smc1aQ9CU62 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc1aQ9CU62 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc1aQ9CU62 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Gm4995-201ENSMUST00000117247 432 ntBASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Smc1aQ9CU62 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms