Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chchd1Q9CQA6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Gm18421-201ENSMUST00000204122 625 ntBASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Gm7367-201ENSMUST00000057611 492 ntBASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chchd1Q9CQA6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Gm6257-201ENSMUST00000163864 910 ntBASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms