Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm8872-201ENSMUST00000197475 1341 ntBASIC19.31■□□□□ 0.68
Rtn4Q99P72 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Gm5403-201ENSMUST00000117105 2795 ntBASIC19.31■□□□□ 0.68
Rtn4Q99P72 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4Q99P72 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.31■□□□□ 0.68
Rtn4Q99P72 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC19.31■□□□□ 0.68
Rtn4Q99P72 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Mir3113-201ENSMUST00000175478 76 ntBASIC19.3■□□□□ 0.68
Rtn4Q99P72 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Gm6312-201ENSMUST00000204060 1194 ntBASIC19.3■□□□□ 0.68
Rtn4Q99P72 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.3■□□□□ 0.68
Rtn4Q99P72 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4Q99P72 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm23935-201ENSMUST00000102303 57 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm24270-201ENSMUST00000102326 57 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm24245-201ENSMUST00000157318 57 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm38217-201ENSMUST00000194358 910 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm44387-201ENSMUST00000196298 145 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.29■□□□□ 0.68
Rtn4Q99P72 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4Q99P72 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Gm15358-201ENSMUST00000119249 520 ntBASIC19.28■□□□□ 0.68
Rtn4Q99P72 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Gm27300-201ENSMUST00000184085 97 ntBASIC19.28■□□□□ 0.68
Rtn4Q99P72 Gm27335-201ENSMUST00000184758 97 ntBASIC19.28■□□□□ 0.68
Rtn4Q99P72 Gm43316-201ENSMUST00000197252 1295 ntBASIC19.28■□□□□ 0.68
Rtn4Q99P72 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms