Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44357-201ENSMUST00000195897 142 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm19658-201ENSMUST00000196231 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44367-201ENSMUST00000196836 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44350-201ENSMUST00000197197 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44390-201ENSMUST00000197533 144 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44313-201ENSMUST00000198018 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44486-201ENSMUST00000198508 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44314-201ENSMUST00000199263 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44394-201ENSMUST00000199558 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44484-201ENSMUST00000199873 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44466-201ENSMUST00000200264 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm44359-201ENSMUST00000200671 138 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Gm19164-201ENSMUST00000210667 640 ntBASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Rnf111Q99ML9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf111Q99ML9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf111Q99ML9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf111Q99ML9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf111Q99ML9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms