Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd1Q99MH6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd1Q99MH6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Gm15372-201ENSMUST00000120729 834 ntBASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd1Q99MH6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkd1Q99MH6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms