Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm9103-201ENSMUST00000119371 405 ntBASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.56□□□□□ -0.08
Cstf3Q99LI7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm25990-201ENSMUST00000102440 86 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm18489-201ENSMUST00000172565 551 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm27459-201ENSMUST00000184860 107 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm34391-201ENSMUST00000203706 907 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Celf4-206ENSMUST00000224553 1729 ntBASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf3Q99LI7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Gm10819-201ENSMUST00000099988 561 ntBASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf3Q99LI7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms