Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.63■□□□□ 0.41
Hps4Q99KG7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.63■□□□□ 0.41
Hps4Q99KG7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hps4Q99KG7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Gm13015-201ENSMUST00000118674 204 ntBASIC17.62■□□□□ 0.41
Hps4Q99KG7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Gm38294-201ENSMUST00000192831 381 ntBASIC17.62■□□□□ 0.41
Hps4Q99KG7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hps4Q99KG7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hps4Q99KG7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hps4Q99KG7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Gm13223-201ENSMUST00000118609 747 ntBASIC17.61■□□□□ 0.41
Hps4Q99KG7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.61■□□□□ 0.41
Hps4Q99KG7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hps4Q99KG7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm29541-201ENSMUST00000191351 678 ntBASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm18049-201ENSMUST00000208909 581 ntBASIC17.6■□□□□ 0.41
Hps4Q99KG7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.6■□□□□ 0.41
Hps4Q99KG7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.6■□□□□ 0.41
Hps4Q99KG7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hps4Q99KG7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps4Q99KG7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms