Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Gm44344-201ENSMUST00000200287 129 ntBASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Gm7730-201ENSMUST00000212486 454 ntBASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd2Q99JR8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd2Q99JR8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Gm14719-201ENSMUST00000121891 340 ntBASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Gm15487-201ENSMUST00000122373 465 ntBASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd2Q99JR8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Gm7775-201ENSMUST00000218871 853 ntBASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd2Q99JR8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd2Q99JR8 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms