Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Mir3081-201ENSMUST00000175305 84 ntBASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Gm8318-201ENSMUST00000182954 872 ntBASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Gm6345-202ENSMUST00000180900 204 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thumpd1Q99J36 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Gm12497-201ENSMUST00000138778 237 ntBASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.4□□□□□ -0.26
Thumpd1Q99J36 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Thumpd1Q99J36 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms