Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1aQ921W0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm14722-201ENSMUST00000118943 689 ntBASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm6623-201ENSMUST00000173570 544 ntBASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1aQ921W0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1aQ921W0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm8825-201ENSMUST00000182565 998 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm4518-201ENSMUST00000182638 718 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.27□□□□□ -0.29
Chmp1aQ921W0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms