Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smc1bQ920F6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.36■□□□□ 0.37
Smc1bQ920F6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smc1bQ920F6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Gm18889-201ENSMUST00000174284 929 ntBASIC17.35■□□□□ 0.37
Smc1bQ920F6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.35■□□□□ 0.37
Smc1bQ920F6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smc1bQ920F6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.34■□□□□ 0.37
Smc1bQ920F6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Gm43125-201ENSMUST00000201724 730 ntBASIC17.34■□□□□ 0.37
Smc1bQ920F6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.34■□□□□ 0.37
Smc1bQ920F6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smc1bQ920F6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Smc1bQ920F6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smc1bQ920F6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Sybu-209ENSMUST00000228639 4113 ntBASIC17.33■□□□□ 0.36
Smc1bQ920F6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Mir6977-201ENSMUST00000184960 64 ntBASIC17.33■□□□□ 0.36
Smc1bQ920F6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smc1bQ920F6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms