Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdha9Q91Y11 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm16198-201ENSMUST00000118766 670 ntBASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Mir3113-201ENSMUST00000175478 76 ntBASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm27301-201ENSMUST00000184012 127 ntBASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdha9Q91Y11 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Gm45747-201ENSMUST00000212203 999 ntBASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Gm10154-201ENSMUST00000084445 354 ntBASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdha9Q91Y11 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha9Q91Y11 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha9Q91Y11 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha9Q91Y11 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha9Q91Y11 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdha9Q91Y11 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gm14494-201ENSMUST00000118786 435 ntBASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gm8000-201ENSMUST00000188378 592 ntBASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gm5264-201ENSMUST00000190584 848 ntBASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdha9Q91Y11 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms