Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb1Q91Y08 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Gm12350-201ENSMUST00000121208 462 ntBASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb1Q91Y08 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb1Q91Y08 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Gm2651-201ENSMUST00000203560 838 ntBASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb1Q91Y08 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms