Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm6376-201ENSMUST00000209407 580 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm10819-201ENSMUST00000099988 561 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H1fooQ8VIK3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Rps4l-201ENSMUST00000071745 943 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
H1fooQ8VIK3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.61□□□□□ -0.39
H1fooQ8VIK3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H1fooQ8VIK3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
H1fooQ8VIK3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms