Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Mir7071-201ENSMUST00000184847 69 ntBASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Gm19164-201ENSMUST00000210667 640 ntBASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rab40cQ8VHQ4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gm12008-201ENSMUST00000117791 755 ntBASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.3□□□□□ -0.44
Rab40cQ8VHQ4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab40cQ8VHQ4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms