Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Gm15483-201ENSMUST00000120338 456 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx39aQ8VDW0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Gm22175-201ENSMUST00000175007 78 ntBASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Gm10253-201ENSMUST00000194270 940 ntBASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx39aQ8VDW0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms