Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Gm10499-201ENSMUST00000174094 934 ntBASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndc1Q8VCB1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ndc1Q8VCB1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ndc1Q8VCB1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Gm27301-201ENSMUST00000184012 127 ntBASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ndc1Q8VCB1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms