Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.44□□□□□ -0.1
Lsm1Q8VC85 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm1Q8VC85 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Gm18489-201ENSMUST00000172565 551 ntBASIC14.43□□□□□ -0.1
Lsm1Q8VC85 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm1Q8VC85 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Carlr-201ENSMUST00000181515 2574 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Gm28033-201ENSMUST00000184224 96 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Gm43767-201ENSMUST00000198933 381 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lsm1Q8VC85 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms