Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Grk6-207ENSMUST00000225925 2769 ntBASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf8Q8VC56 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rnf8Q8VC56 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.52□□□□□ -0.09
Rnf8Q8VC56 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf8Q8VC56 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf8Q8VC56 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf8Q8VC56 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms