Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.12■□□□□ 0.17
Nup58Q8R332 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.11■□□□□ 0.17
Nup58Q8R332 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup58Q8R332 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.11■□□□□ 0.17
Nup58Q8R332 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Nup58Q8R332 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup58Q8R332 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.1■□□□□ 0.17
Nup58Q8R332 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.1■□□□□ 0.17
Nup58Q8R332 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Gm6376-201ENSMUST00000209407 580 ntBASIC16.1■□□□□ 0.17
Nup58Q8R332 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nup58Q8R332 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup58Q8R332 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup58Q8R332 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.09■□□□□ 0.17
Nup58Q8R332 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.09■□□□□ 0.17
Nup58Q8R332 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Nup58Q8R332 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup58Q8R332 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms