Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc3Q8R323 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc3Q8R323 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc3Q8R323 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.93□□□□□ -0.18
Rfc3Q8R323 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.93□□□□□ -0.18
Rfc3Q8R323 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Gm13597-201ENSMUST00000121239 375 ntBASIC13.92□□□□□ -0.18
Rfc3Q8R323 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Gm2756-201ENSMUST00000195851 400 ntBASIC13.92□□□□□ -0.18
Rfc3Q8R323 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.92□□□□□ -0.18
Rfc3Q8R323 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.92□□□□□ -0.18
Rfc3Q8R323 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.92□□□□□ -0.18
Rfc3Q8R323 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.92□□□□□ -0.18
Rfc3Q8R323 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.91□□□□□ -0.18
Rfc3Q8R323 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm17271-201ENSMUST00000165535 355 ntBASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Mir8117-201ENSMUST00000184773 107 ntBASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc3Q8R323 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rfc3Q8R323 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms