Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim2Q8R1G6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim2Q8R1G6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.24■□□□□ 0.35
Pdlim2Q8R1G6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim2Q8R1G6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Gm26039-201ENSMUST00000158152 144 ntBASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim2Q8R1G6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms